PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG064550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 177aa    MW: 18314.3 Da    PI: 6.5257
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG064550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB171.11.3e-5334129297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       +eqdr+lPianv+rimk+vlP nak+sk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wa++ lGf+dyv+p++ yl k+rele
  TRIDC3AG064550.1  34 KEQDRLLPIANVGRIMKQVLPPNAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWAFSALGFDDYVDPMRRYLLKFRELE 126
                       89******************************************************************************************* PP

             NF-YB  95 gek 97 
                       g++
  TRIDC3AG064550.1 127 GDR 129
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
GSGSGVGGGG GGGGGGSPPE RLHGGGGSGD QGIKEQDRLL PIANVGRIMK QVLPPNAKVS  60
KEAKETMQEC VSEFISFVTG EASDKCHKEK RKTVNGDDVC WAFSALGFDD YVDPMRRYLL  120
KFRELEGDRA AAAASSRGGL PVPDASTSGA GASGSGNFMF EAMDRRDNTG PGTGRQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-56NF-YB family protein