PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG068540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 200aa    MW: 23104.9 Da    PI: 9.7418
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG068540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.33.2e-19331626128
               NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknra..tksgyWkatgkdkevlsk 95 
                        F+Pt++elv ++L+++++g   +++ ++ e+d + + PwdL +++   ++ + yfF+ r++ +    + +r+     g+W ++g+ ++  s 
  TRIDC3AG068540.1  33 SFEPTEDELVLHFLRPQLRGFAPRVAGAVVEADPCAAPPWDLLERHGLlRRGHGYFFHARRRGKGGPVQVRRTplGGGGTWMHSGNREDRRSV 125
                       5*********************9**999**************754444244477******9998877777774225599******97777766 PP

               NAM  96 kgelvglkktL...vfykg.rapkgektdWvmheyrl 128
                       ++  v  + ++    fy   +a+  ++t Wvm ey++
  TRIDC3AG068540.1 126 TELGVVARWSMtryCFYARdSAQGRRSTGWVMSEYEI 162
                       5555555554411157755155555689*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
RREGRPHRKE MEEETNLGGA GGVEVKEEEG VESFEPTEDE LVLHFLRPQL RGFAPRVAGA  60
VVEADPCAAP PWDLLERHGL LRRGHGYFFH ARRRGKGGPV QVRRTPLGGG GTWMHSGNRE  120
DRRSVTELGV VARWSMTRYC FYARDSAQGR RSTGWVMSEY EITDPRCYRR ADDGEEEEYW  180
VLCHVRRSTR KNVKPRSRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.22e-10NAC family protein