PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG070010.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 202aa    MW: 22181.3 Da    PI: 8.4923
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG070010.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-1350102155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       r+ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ ++ +YI +Lq
  TRIDC3AG070010.2  50 RKISHNAYERDRRKQLNELYSDLRSLLPDtD---HTKKLSIPITVSRVLKYIPELQ 102
                       6889*************************55...7777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
ADIFSVAAGH HHPQWPGLDH DVPLAPAANN GTSSGGYGSP GGGDGSGSHR KISHNAYERD  60
RRKQLNELYS DLRSLLPDTD HTKKLSIPIT VSRVLKYIPE LQKQVDGLEK KKEELTRANC  120
KPGVLTMKEN MAPIVSATCL DDREIMVQVS LVSTMAGVLP MSKCIKVLEN EGLRLISSST  180
SAFHNRTFYS LHLQVHINRC IC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-33bHLH family protein