PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG070360.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SRS

Protein Properties

Length: 161aa MW: 16152.2 Da PI: 5.4677

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG070360.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	97.6	2.4e-30	2	85	81	154
DUF702 81 kkqsalsstklssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++q+++s+t++s+a+++++ +t+s lP++v+++avfrcvrv+svddge+e+aYq++v+i+GhvfkG+LydqG+++ TRIDC3AG070360.1 2 SQQATTSHTSTSNATTPRSYDTTSshqdasfrgyLPRQVRAPAVFRCVRVTSVDDGEDEYAYQATVTINGHVFKGFLYDQGVDD 85 5788999999999999999999988999*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
SSQQATTSHT STSNATTPRS YDTTSSHQDA SFRGYLPRQV RAPAVFRCVR VTSVDDGEDE 60 YAYQATVTIN GHVFKGFLYD QGVDDGRASN DMDSSTGGAV PNMSELHLGG GGGNAARGGG 120 GSSSMAPSDM YGGGGAGGAG GGGGGQQHIL GGGSSYGNTM N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	7e-27	SRS family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG070360.1