PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG075030.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 725aa    MW: 85143.8 Da    PI: 9.1119
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG075030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1799e-2521115191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+ree++ k   ++++rr+r+ tr+gC+akl++++++ +g+w v+++  eH+H+l
  TRIDC3AG075030.1  21 EFYNKYALEKGFSVRKSYIEWDGSNKYIILRKIVCSRQGFREEKHIKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 113
                       6*****************************************9988777889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC3AG075030.1 114 AP 115
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    
SMFEYVNVVS KMFDSEAEGY EFYNKYALEK GFSVRKSYIE WDGSNKYIIL RKIVCSRQGF  60
REEKHIKRKM EDRKRRPRSL TRVGCNAKLV ITRQEETGRW FVKDFIDEHS HPLAPRDLSC  120
LLRSHRRIRD EQKADNADME KCGIRKYRIM DILCFQYVGF DKVGCIKRDV YNFCHANKQE  180
IISAGNANTV IMDMMARRER DVHFLFKYLV DEHGHLKGLF WADSQSRLDY EAFRDVIVFD  240
STYRTNKYNL PFVPFVGLNH HHSTVIFGYG IISHETSQAY EWMLRTFSDC MAQKHPISVI  300
TDGDLAMQRA IRMVWPDSNH RLCIWHIQQN IVRHLHDDDV KEEFRSFIYD TSSIEEHEIK  360
WIQFLQRNKV SSVESWLHQM YQMRKLWCAP YLEGRCFLGL SSNQRSESLN SVLHTHLEGK  420
MSLFEMLEHY ERCLASRRIN EALHDIKALQ SVPFTEENAS PLEKHAATVF TPSVFKMVLW  480
SIDAVSKCQI REILDGSEDS TYVVSKQERM DKKFGVRIEE QGGLLHRVSC SCRKLECVDT  540
SCSHIFYIFR ILKQTILLGC CVPTRWTMNA KCAYAPTRKK QMYDYSVSLQ RYRELRNCSH  600
AASFKACHSD EDYHRLKMLL QAQHHGKQSS FEQADSKEST NAQHNSIRFG PLMPHSEKVD  660
KVLDPVHVPG RGAPKKRLQA KTKKSRSQNI CGYCKKAGHN RRKCAKLLNV RNMFIFIFCM  720
CFTHN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17277DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-91FAR1 family protein