PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG075700.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 259aa MW: 28506 Da PI: 9.9009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG075700.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	58	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l+ v+++G ++W+ a+ g++Rt+k+c++rw +yl TRIDC3AG075700.2 58 KGPWTEQEDMKLAWFVRLFGERRWDFLAKVSGLNRTGKSCRLRWVNYL 105 79********************************************97 PP
2	Myb_DNA-binding	57.7	2.8e-18	111	155	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+++eE+ l vd+++++G++ W++Ia+ m+ gRt++++k++w+++ TRIDC3AG075700.2 111 RGRMSPEEERLVVDLHARWGNR-WSRIAKAMP-GRTDNEIKNYWRTH 155 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
LIPPPAAPPT SSVRSSLVPS CCVHITSPSM KTKQASKAKV APSPGKEEEA VAPGGFRKGP 60 WTEQEDMKLA WFVRLFGERR WDFLAKVSGL NRTGKSCRLR WVNYLHPDLK RGRMSPEEER 120 LVVDLHARWG NRWSRIAKAM PGRTDNEIKN YWRTHTRKLH KDTRASAASA STTTSTSMSA 180 ASPATTSSSS SSTIDDDNNS HHGHRDQETA ASQEQADNQL LYTAGIGMDS HLLWNDAIMD 240 SYAWGAAVPS MIVPPPSSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	6e-61	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG075700.2