PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG000230.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 228aa MW: 25253.6 Da PI: 8.7843

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG000230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.3e-19	84	138	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq+ Le +F++++++s+++++ LA++l+L rqV vWFqNrRa+ k TRIDC3BG000230.1 84 RKKLRLTKEQTALLEGHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTK 138 78889************************************************98 PP
2	HD-ZIP_I/II	118.5	3.6e-38	84	172	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq +lLE +F+e+++L++++K++lar+L l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l++en+rL++e ++Lr + TRIDC3BG000230.1 84 RKKLRLTKEQTALLEGHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTKENRRLHRELQHLR-A 172 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MFMAQEEAGL ALGLSLGLGA GHHHHHLLQQ KEAAPLEPCL SLSLAGAGAV KREEEEDEER 60 ALIYCSSAAD DHIEGYNSSS GGSRKKLRLT KEQTALLEGH FKEQSTLSHK QKASLARQLS 120 LRPRQVEVWF QNRRARTKLK QTEVDCELLK RCCETLTKEN RRLHRELQHL RALHHHQHHH 180 HHPAAAFFIP SAATAASVCP SCPGAPPAHA ADRPATKRSF FATKSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	89	SRKKLRL
2	133	141	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	8e-42	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG000230.1