PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG000320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 206aa    MW: 22244.2 Da    PI: 10.1089
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG000320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.42.2e-072387555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC.................TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkas..............kapskKlsKaeiLekAveYIksLq 55
                       + +E++RR +++    +L +l+P +s              + ++   +  + L  A  YIk+L+
  TRIDC3BG000320.2 23 RKDVEKNRRLHMKGLCLKLSSLVPASSssdhhlrhysssppSSNKDAATQLDQLDSAAAYIKQLR 87
                      5789*********************666***********96666666****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MKSRRQSGRG GAMVADGGCK MERKDVEKNR RLHMKGLCLK LSSLVPASSS SDHHLRHYSS  60
SPPSSNKDAA TQLDQLDSAA AYIKQLRGRI DDLKRRKQAA LSGGTAGCSS SVSAGDYKAQ  120
TTSLPVIEVR HQDGTLDVAL VSEVGRPFRL HEVIAVLEQE GAEVVSASFS VVGDKIFYTL  180
HSQAFCPRIG LDARRVDQRL RGLAAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.12e-20bHLH family protein