PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG000410.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 230aa    MW: 25196.4 Da    PI: 12.606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG000410.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.00034076432
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC.......... CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkas........k 32
                        + +E++RR +++    +L +l+P +s         
  TRIDC3BG000410.3 40 ERKDVEKNRRLHMKGLCLKLSSLVPASSssdhhlrhY 76
                      56899*********************64355555551 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
WERRDQAQLT STMKSRRQSG RGGAMLLPDG NLHSSGSKME RKDVEKNRRL HMKGLCLKLS  60
SLVPASSSSD HHLRHYSSSP PSSNKVRTRR GDTAGPVGQR GGVHQAAPGP DRRPETPQAG  120
RRLRHRWLLI LHLHGRLQGS SFNGHDSAAG DRGAAPGRNS GRGAGERGRA AVPAARGDRR  180
AGAGGRRGGQ RQLLCRRRQD LLHGPFPGVV PPHRPRGRPR RPRAARPRRN