PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG000440.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 210aa    MW: 23437.4 Da    PI: 7.3963
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG000440.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.41.1e-072978554
                      HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
                       +e+Er RR++++   ++L +l+Pk  +  +++  ++    L +   YIk+L
  TRIDC3BG000440.1 29 RKEAERERRQHMKALCAKLASLIPKeHF--SNPDtMTQLGSLDESASYIKKL 78
                      579**********************876..55555999999********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
EMDVQAHEAT GRMRGRASGG TTTTRVVERK EAERERRQHM KALCAKLASL IPKEHFSNPD  60
TMTQLGSLDE SASYIKKLKE RVDELHHRRS SAKEMAAARG DSGASTPTTT PTTSGGAGSL  120
EREKHWEAWA PVLEVRQHDD TSLDVVLVCS TERPIMLHEV ITILEEEGAE VINANHSIAG  180
HKIFYTIHSQ VRTYIGTAFH IYARKYNLCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-11bHLH family protein