PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG003910.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 714aa    MW: 83431.6 Da    PI: 8.6259
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG003910.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1804.4e-2528122191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+re+++ k   ++++rr+r+ tr+gC+akl++++++ +g+w v+++  eH+H+l
  TRIDC3BG003910.2  28 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 120
                       6******************************************999888889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC3BG003910.2 121 AP 122
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    
MAYANDESMF EYVNVVSKMF DSEAEGYEFY NKYALEKGFS VRKSYVEWDG SNKYIILRKI  60
VCSRQGFRED KHMKRKMEDR KRRPRSLTRV GCNAKLVITR QEETGRWFVK DFIDEHSHPL  120
APRDLSCLLR SYRRISDEQK ADIADMEKCG IRKYRIMDIL CFQYGGFDKV GCIKRDVYNF  180
CHANKQETIS AGDAKTVIMH MMARRERDVD FFFKYLVDEH GHLKGLFWAD SQSRLDYEAF  240
GDVIVFDSTY RTNKYNLPFV PFVGLNHHRS TVIFGCGIIS HETSQAYEWM LRTFSDCMAQ  300
KHPISVITDG DLAMQRAIRV VWPDSNHRLC IWHIQQNIVR HLHDDDVKEE FRYFIYDTSS  360
IEEHEIKWIQ FLQRNKVTSE ESWLHQMYQM RKLWCAPYLE GRCFLGLSSN QRSESLNSVL  420
HTHLEGKMSL FEMLEHYEHC LASRRINEAL HDVEALQSVP FTEENALPLE KHAATVFTPR  480
VFKMVLWSID AVSKCQIREI LDGLEDSTYV VSKQERMDKK FGVRIEEQGG LLHRVSCSCR  540
KLECAGTPCS HIFYILGILK QTILPGCCVP TRWTMNAKCA YAPTRKNQMY DYSLSLQRYR  600
ELRNCSHAAS FQACHSDEDY HCLKMLLQAQ HHGKQSSFEL ADSKESTNAQ HNSIRFGPLM  660
PHSQKVDKVL DPVHVPGRGA PKKRLQSKTK KSRSQNICGY CKKPGHNRRK CAKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17984DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-99FAR1 family protein