PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG005370.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 261aa    MW: 28270.1 Da    PI: 7.9833
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG005370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.5e-173178148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd ll  +++ +G g+W++ ar+ g++Rt+k+c++rw++yl
  TRIDC3BG005370.1 31 RGPWTLEEDNLLMSYIACHGEGRWNLLARCSGLKRTGKSCRLRWLNYL 78
                      89********************************************97 PP
2Myb_DNA-binding51.42.5e-1684127146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T+eE++ ++++++++G++ W++Ia++++ gRt++++k++w++
  TRIDC3BG005370.1  84 RGNLTAEEQLVILELHAKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 127
                       7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSRRKGAAAA GGGAGPMAMA AMEEEAAELR RGPWTLEEDN LLMSYIACHG EGRWNLLARC  60
SGLKRTGKSC RLRWLNYLKP DIKRGNLTAE EQLVILELHA KWGNRWSRIA QHLPGRTDNE  120
IKNYWRTRVQ KQARQLKVDA NSAVFREAVR CYWMPRLLDK MSMAAASTAA PPPLMEQHGQ  180
GVLSSSQSPP IGSDQLCCYG PAAAGFDPSP SASTSGSTAA AALQPAPVPC FSELNWEDQY  240
CYPSGGDLDG GAGGMELDSA A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-74MYB family protein