PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG008350.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 176aa    MW: 19159.7 Da    PI: 9.7264
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG008350.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B389.52.6e-28190787
                      .-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3  7 psdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
                      psdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL +gD++vF+ +  
  TRIDC3BG008350.3  1 PSDVGKLNRLVVPKQHAEKHfplkrtpetTTTTGKGVLLNFEDGEGKVWTFRYSYWNSSQSYVLTKGWSRFVREKGLGAGDSIVFSCSAY 90
                      79*******************9987776644455999************************************************96543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
PSDVGKLNRL VVPKQHAEKH FPLKRTPETT TTTGKGVLLN FEDGEGKVWT FRYSYWNSSQ  60
SYVLTKGWSR FVREKGLGAG DSIVFSCSAY GQEKQFFIDC KKNKTMASCP ADGGAATASP  120
PVAEAANGEQ VRVVRLFGVD IAGEKRGRAA PAEQELFKRQ CVAHSQHSPA LGAIVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-45RAV family protein