PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG008380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 218aa    MW: 24236.8 Da    PI: 10.8394
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG008380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B395.82.9e-3037136190
                       EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                       f+k+ tpsdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL +gD++vF+ 
  TRIDC3BG008380.1  37 FEKAVTPSDVGKLNRLVVPKQHAEKHfplkrtqerTTTTGNGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLAAGDSIVFSC 129
                       89*************************99887766444448999***********************************************97 PP

                       -SS.SEE CS
                B3  85 dgr.sef 90 
                       +   +e+
  TRIDC3BG008380.1 130 SAYgQEK 136
                       6543444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MLRKHTYADE LRQGLRRGRG MGARAQPTPS WAREPLFEKA VTPSDVGKLN RLVVPKQHAE  60
KHFPLKRTQE RTTTTGNGVL LNFEDGEGKV WRFRYSYWNS SQSYVLTKGW SRFVREKGLA  120
AGDSIVFSCS AYGQEKQLFI DCKKNTTVNS GKSASPLPVV ETAKGEQVRV VRLFGVDIAG  180
VKRGRAATAE QGPPELLKRQ CVPLPHGQRS PALGAFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.25e-56RAV family protein