PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG008380.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 195aa    MW: 21581.7 Da    PI: 10.6004
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG008380.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.22.1e-3014113190
                       EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                       f+k+ tpsdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL +gD++vF+ 
  TRIDC3BG008380.3  14 FEKAVTPSDVGKLNRLVVPKQHAEKHfplkrtqerTTTTGNGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLAAGDSIVFSC 106
                       89*************************99887766444448999***********************************************97 PP

                       -SS.SEE CS
                B3  85 dgr.sef 90 
                       +   +e+
  TRIDC3BG008380.3 107 SAYgQEK 113
                       6543444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
RAQPTPSWAR EPLFEKAVTP SDVGKLNRLV VPKQHAEKHF PLKRTQERTT TTGNGVLLNF  60
EDGEGKVWRF RYSYWNSSQS YVLTKGWSRF VREKGLAAGD SIVFSCSAYG QEKQLFIDCK  120
KNTTVNSGKS ASPLPVVETA KGEQVRVVRL FGVDIAGVKR GRAATAEQGP PELLKRQCVP  180
LPHGQRSPAL GAFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.23e-54RAV family protein