PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG008420.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 178aa    MW: 19552.3 Da    PI: 10.3215
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG008420.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B389.52.7e-28290685
                      ..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  6 tpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85
                      tpsdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL +gD+++F+ +
  TRIDC3BG008420.1  2 TPSDVGKLNRLVVPKQHAEKHfpltrtpetPTTTGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLGAGDSILFSCS 90
                      79**********************98886644455899************************************************943 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
VTPSDVGKLN RLVVPKQHAE KHFPLTRTPE TPTTTGKGVL LNFEDGEGKV WRFRYSYWNS  60
SQSYVLTKGW SRFVREKGLG AGDSILFSCS LYEQEKQFFI DCKKNTSMNG GKSASPLPVG  120
VTTKGEQVRV VRLFGVDISG VKRGRAATAT AEQGLQELFK RQCVAPGQHS PALGAFAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.26e-45RAV family protein