PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG010410.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 173aa    MW: 19146.9 Da    PI: 8.0137
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG010410.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.3e-051134123
                      EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                      ++C  C + F+r ++L+ H+r+ H
  TRIDC3BG010410.1 11 HRCAACYRQFNRMEHLVEHMRSsH 34
                      79*******************997 PP
2zf-C2H213.90.000164159220
                      EETTTTEEESSHHHHHHHH CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHi 20
                      +C+ Cgk++++ + L+ H+
  TRIDC3BG010410.1 41 RCGVCGKHCRSLDALRDHL 59
                      6*****************7 PP
3zf-C2H212.20.000548099322
                      ETTTTEEESSHHHHHHHHHH CS
           zf-C2H2  3 CpdCgksFsrksnLkrHirt 22
                      Cp C  +F++ s L++H   
  TRIDC3BG010410.1 80 CPLCLAVFPTTSALRVHCAA 99
                      *****************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MNNSADAHSR HRCAACYRQF NRMEHLVEHM RSSHHSHHEP RCGVCGKHCR SLDALRDHLD  60
FGTSLPFKPA CATAFQAHGC PLCLAVFPTT SALRVHCAAC KLSRGEGAVA LGCKMVGGGS  120
DGTLDVCARV CAVDEHEDIL YESFVKPLIP VTHYRYETTR IRPEHLRDAP TVK