PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG010410.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 194aa MW: 21360.5 Da PI: 8.3932

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG010410.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	11	34	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C C + F+r ++L+ H+r+ H TRIDC3BG010410.2 11 HRCAACYRQFNRMEHLVEHMRSsH 34 79*******************997 PP
2	zf-C2H2	13.7	0.00019	41	59	2	20
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 +C+ Cgk++++ + L+ H+ TRIDC3BG010410.2 41 RCGVCGKHCRSLDALRDHL 59 6*****************7 PP
3	zf-C2H2	12	0.00064	80	99	3	22
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 Cp C +F++ s L++H TRIDC3BG010410.2 80 CPLCLAVFPTTSALRVHCAA 99 *****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MNNSADAHSR HRCAACYRQF NRMEHLVEHM RSSHHSHHEP RCGVCGKHCR SLDALRDHLD 60 FGTSLPFKPA CATAFQAHGC PLCLAVFPTT SALRVHCAAC KLSRAPIPSS VQSLTRTMSR 120 MGVRGGEGAV ALGCKMVGGG SDGTLDVCAR VCAVDEHEDI LYESFVKPLI PVTHYRYETT 180 RIRPEHLRDA PTVK

Link Out ? help Back to Top
Ensembl	TRIDC3BG010410.2