PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG011620.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 415aa MW: 45227.8 Da PI: 4.798

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG011620.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	79.9	2.2e-25	103	168	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r e+sL+ lt+kf++ll+++e+gi++ln+va+ L v k+RRiYDi+NVLe+++l+ekk kn+irw+g TRIDC3BG011620.2 103 RAEHSLGELTKKFISLLKQAEDGILDLNNVAEIL---VV--KKRRIYDITNVLEGIGLLEKKLKNRIRWRG 168 6799****************************...88..9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
PSSSAPAAAS RGSAGGDVEE GIVIRTPLKR KAPCGESDAI ESTEWMITSP GFTEGVSSPH 60 MTPISGKAAR TYKSKAKGSK DGLQTPISNA GSPGTPLTPG SSRAEHSLGE LTKKFISLLK 120 QAEDGILDLN NVAEILVVKK RRIYDITNVL EGIGLLEKKL KNRIRWRGLD DSGANLDNEI 180 SVLETELENL KLQEKALDNR ISEMHEKVRE LTEEENNQRW LYLTEDDIKG LPCFQNETLI 240 AIKAPHGTTL EVPDPDEAGD YIQRRYTIVI RSTMGSIDLY LVSKFEENME ELVGVATPPR 300 HANVAEPAST DGFIATEAGQ SSRSKDKLPN IQHIHRTPDL NAQVGGMAKI TPEFDVDADY 360 YLLTDGDASS ITDMWRTAPE VQWDQFLAEE ATALRTPQQH PAVVGKSTAV GPTCG

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

PSSSAPAAAS RGSAGGDVEE GIVIRTPLKR KAPCGESDAI ESTEWMITSP GFTEGVSSPH  60
MTPISGKAAR TYKSKAKGSK DGLQTPISNA GSPGTPLTPG SSRAEHSLGE LTKKFISLLK  120
QAEDGILDLN NVAEILVVKK RRIYDITNVL EGIGLLEKKL KNRIRWRGLD DSGANLDNEI  180
SVLETELENL KLQEKALDNR ISEMHEKVRE LTEEENNQRW LYLTEDDIKG LPCFQNETLI  240
AIKAPHGTTL EVPDPDEAGD YIQRRYTIVI RSTMGSIDLY LVSKFEENME ELVGVATPPR  300
HANVAEPAST DGFIATEAGQ SSRSKDKLPN IQHIHRTPDL NAQVGGMAKI TPEFDVDADY  360
YLLTDGDASS ITDMWRTAPE VQWDQFLAEE ATALRTPQQH PAVVGKSTAV GPTCG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-107	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG011620.2