PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG011840.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 213aa MW: 23244 Da PI: 8.9623

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG011840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.6	2.8e-15	27	87	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e +++ l + +++V++WFqNrR + ++ TRIDC3BG011840.1 27 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRLLLerfgAVRDANVFYWFQNRRSRSRR 87 89***************99***********************************997 PP
2	Wus_type_Homeobox	104.9	5.3e-34	26	88	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +r+RW+P+peQi iLe++++sG+++P+k+e+ ri+ Le++G+++d+NVfyWFQNr++R+r++ TRIDC3BG011840.1 26 TRSRWAPKPEQILILESIFNSGMVNPAKDETARIRLLLERFGAVRDANVFYWFQNRRSRSRRR 88 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MDQHNHGQAP AHRGGRSNEG GEPTTTRSRW APKPEQILIL ESIFNSGMVN PAKDETARIR 60 LLLERFGAVR DANVFYWFQN RRSRSRRRAR QLQQSCGGTG DADQLSSNAA AAGHGCHGIG 120 TSPYNTMQYG QLCGGVSAAA AAVTGPPRFS VDDADSGDDL FAIPRQMGLM SRGGEDQYGY 180 TFLGRRCRCS SMAQCMRCRA PACWTWQAHS GVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	3e-28	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG011840.1