PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG013080.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 239aa    MW: 26507.9 Da    PI: 9.1387
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG013080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.33.6e-54301591129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdee+++ yL++k+ +  +++ ++i evd++k ePw+Lp+k+k +e+ewyf++++d+ky+tg r+nratk+gyWkatgkdke++
  TRIDC3BG013080.1  30 LPPGFRFHPTDEEIITSYLAPKILNPAFNA-TAIGEVDLNKNEPWELPNKAKMGENEWYFYCQKDRKYPTGIRTNRATKAGYWKATGKDKEIV 121
                       79*************************999.88***************99999**************************************** PP

               NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +    + l+g+kktLvfykgrap+gekt+Wvmheyrle
  TRIDC3BG013080.1 122 NPhcMSMLMGMKKTLVFYKGRAPSGEKTNWVMHEYRLE 159
                       *9777788****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
SFHSCIQRSH RASAMADHLQ VQQQQQQLEL PPGFRFHPTD EEIITSYLAP KILNPAFNAT  60
AIGEVDLNKN EPWELPNKAK MGENEWYFYC QKDRKYPTGI RTNRATKAGY WKATGKDKEI  120
VNPHCMSMLM GMKKTLVFYK GRAPSGEKTN WVMHEYRLEI GKQSTSGLPT TIANAASNNV  180
SSKEYVVCRI FHKNTGSGVS SMVSHEDVGT GPGNNDQGNG GATTTDKILS MSMRTGGAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.24e-80NAC family protein