PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG013110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 221aa    MW: 24834.7 Da    PI: 10.0402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG013110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.59.5e-52371651129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lp GfrFhPtd e+++ yL +kv +k++++ +++ evd++k++Pw+Lp++++ +ekew fFs++d+ky+tg r+nrat++gyWkatgkdke++
  TRIDC3BG013110.1  37 LPSGFRFHPTDVEIITAYLVPKVLKKPFDT-RAVGEVDLNKHDPWELPEMANMGEKEWCFFSQKDRKYPTGIRTNRATTAGYWKATGKDKEIF 128
                       699**************************9.88***************9888999************************************** PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +  + +l+g+kktLvfykgrapkgekt+W+mheyrle
  TRIDC3BG013110.1 129 HPpTMSLIGTKKTLVFYKGRAPKGEKTNWIMHEYRLE 165
                       *988889****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
HISIVTPNIC ATIGPISQRT SAMAKHLQVQ QQQQLKLPSG FRFHPTDVEI ITAYLVPKVL  60
KKPFDTRAVG EVDLNKHDPW ELPEMANMGE KEWCFFSQKD RKYPTGIRTN RATTAGYWKA  120
TGKDKEIFHP PTMSLIGTKK TLVFYKGRAP KGEKTNWIMH EYRLERGKQP APNLPTDITN  180
TSTINASSCR GKQPALQCII IIGATVVSDC IFFVPATSHW G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-69NAC family protein