PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG014740.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 274aa    MW: 31375.7 Da    PI: 10.8018
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG014740.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.18.2e-1774125150
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS..EEEEEE CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg..klyeys 50 
                       kri n+  r  tf kRr g+lKKA EL vLC+++  +++f  +g  kl++y+
  TRIDC3BG014740.2  74 KRIHNDVSRRATFGKRRRGLLKKARELAVLCGVDLGLLVFDDDGagKLFDYC 125
                       79**************************************998533788887 PP
2K-box311.1e-111572341490
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLes.LslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 
                       ++ l   +a L++e + L+ + R+  GedL s  +  eL  Leq+Le+ l ++R+ K++ l +q++e+ +k   +  e
  TRIDC3BG014740.2 157 QQPLADIIAGLRREHDRLEVSVRRQTGEDLPSaATAAELDDLEQRLERVLGEVREMKDKPLEQQLDESYHKVIVILGE 234
                       46666678899*******************7725789******************************99998766555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
RLYGGAWRRT ITRGEERRAH PSSQFQSQLL QPLPGRTKKK KNRIRATQAS SSSASIAPRV  60
PSQEKMGRGR TEMKRIHNDV SRRATFGKRR RGLLKKAREL AVLCGVDLGL LVFDDDGAGK  120
LFDYCSPNTS WSELIERYES ITNHKFQFQG INHVDDQQPL ADIIAGLRRE HDRLEVSVRR  180
QTGEDLPSAA TAAELDDLEQ RLERVLGEVR EMKDKPLEQQ LDESYHKVIV ILGEPKSIQR  240
HTKQFFIRNL TVNGLVHLTR RCTPWRTRTA SFAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.22e-13MIKC_MADS family protein