PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG014870.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 210aa    MW: 21960.9 Da    PI: 8.7719
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG014870.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260911.5e-284107199
            DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                       +C++C+vlr++C ++C+++p++     +++q++++ +++k++G++ +l+ll+a  +  r+++++sl+yeA+ r+ +PvyG+vg+++++q++ +
  TRIDC3BG014870.3   4 SCNGCRVLRKGCGEGCTIRPCLewirsADAQANATVFLAKFYGRAGLLNLLAADGPGLRPALFRSLLYEACGRMVNPVYGSVGLLWSGQWEAC 96 
                       6*********************9999667889************************************************************* PP

            DUF260  89 qlkaelallke 99 
                       q+++e++l ++
  TRIDC3BG014870.3  97 QAAVEAVLKGR 107
                       ****9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MRMSCNGCRV LRKGCGEGCT IRPCLEWIRS ADAQANATVF LAKFYGRAGL LNLLAADGPG  60
LRPALFRSLL YEACGRMVNP VYGSVGLLWS GQWEACQAAV EAVLKGRPIV RVTSDAPLAA  120
CDIRHVAKAD RPAASPEAAA AAGTVLGVSR AGRTGFKRAS SSTAKPKSKS FSGAKHDGGL  180
DQAPSHEESA GSHDHGSHVE DDGMAVEQAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.13e-65LBD family protein