PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG015220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 314aa    MW: 36044.2 Da    PI: 7.2343
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG015220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.00011109131223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       +C+ C+++++++ +L  Hi+  H
  TRIDC3BG015220.1 109 SCSVCSRVYPTSRLLSIHISEaH 131
                       6******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MQQNPAEAME VSAPSEAGAP KDMGPWLGFW EVSRRRLTPD DPFFAAGDME RELLAKHVAL  60
DLSDDDRYQL EKMDVASVSM VCCPIAGCGA HLDCLEDFED HYSTRHTASC SVCSRVYPTS  120
RLLSIHISEA HDSFFQAKVA RGFPMYECLV EGCGEKLKTY KSRQQHLVDK HQFPNSFEFF  180
KRAQPSQRHR QKYHRRQTAY KGEETRDTVM DVDGKNPRQS KSKYRPKQRD HKEPKENEHC  240
HKESKENEHH EKEAKESDME VEQKIDELSS AVSRLSTADS VPSSVTFGHR RSRGLTFVPR  300
SIRQNKQVSQ PEAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.12e-91C2H2 family protein