PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG015220.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 235aa MW: 27237.4 Da PI: 8.6387

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG015220.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.5e-05	30	52	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L Hi+ H TRIDC3BG015220.3 30 SCSVCSRVYPTSRLLSIHISEaH 52 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MVCCPIAGCG AHLDCLEDFE DHYSTRHTAS CSVCSRVYPT SRLLSIHISE AHDSFFQAKV 60 ARGFPMYECL VEGCGEKLKT YKSRQQHLVD KHQFPNSFEF FKRAQPSQRH RQKYHRRQTA 120 YKGEETRDTV MDVDGKNPRQ SKSKYRPKQR DHKEPKENEH CHKESKENEH HEKEAKESDM 180 EVEQKIDELS SAVSRLSTAD SVPSSVTFGH RRSRGLTFVP RSIRQNKQVS QPEAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	7e-72	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG015220.3