PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG015320.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 154aa MW: 17186.4 Da PI: 10.6139

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG015320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ ++++G tW+++a+ g++R++k+c++rw +yl TRIDC3BG015320.1 16 KGLWSPEEDERLYTRITRHGVSTWSSVAQLAGLRRSGKSCRLRWMNYL 63 678*******************************************97 PP
2	Myb_DNA-binding	44.8	3e-14	71	112	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + ++ E+e ++ + k lG++ W+ Ia++m+ gRt++++k++w++ TRIDC3BG015320.1 71 PISKREEETIISLQKSLGNR-WSVIAAKMP-GRTDNEIKNYWNS 112 56889*************.*****.*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
SQADVGGEVE AHKERKGLWS PEEDERLYTR ITRHGVSTWS SVAQLAGLRR SGKSCRLRWM 60 NYLRPDLKKE PISKREEETI ISLQKSLGNR WSVIAAKMPG RTDNEIKNYW NSRIRKRQNA 120 SPAGGKGDSG CAKQQGDLPA ADDKASVLAG PRAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	2e-48	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG015320.1