PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016050.28
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 240aa    MW: 26489.6 Da    PI: 9.039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016050.28genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.2e-1862111255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  TRIDC3BG016050.28  62 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 111
                        59****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
RLRKKKVRRR STGPDSVAET IKKWKEENQK LLQENGSRKA PAKGSKKGCM AGKGGPENSN  60
CAYRGVRQRT WGKWVAEIRE PNRGNRLWLG SFPTAVEAAR AYDDAARAMY GAKARVNFSE  120
QSPDASSGCT LAPPLLMSNG ATAASHPSDG KDESESAGTV AHKVKKEVSN DLRSTHEEHK  180
TLEVSQPKGK ALHKEANVSY DYFNVEEVLD MIIVELSADV KMEAHEEYQD GDDGFSLFSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
118RLRKKKVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-33ERF family protein