PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 150aa    MW: 17046.8 Da    PI: 10.0054
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox672.4e-211373257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      r+R+t+t+ ql++Le +F++ n +ps++++++++++l    +++e++V++WFqNrRa+ k+
  TRIDC3BG016300.1 13 RQRWTPTQMQLQILEIVFNQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 73
                      89*****************99**************************************97 PP
2Wus_type_Homeobox101.27.4e-331275265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPt+ Q++iLe ++++G  tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq
   TRIDC3BG016300.1 12 ARQRWTPTQMQLQILEIVFNQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 75
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
PLMVHGGQKI TARQRWTPTQ MQLQILEIVF NQGNGTPSKQ KIKDITAELS QHGQISETNV  60
YNWFQNRRAR SKRKQAASSL PNNAESEAEG DEESLTDKKP RSDGSQQQNM AVRAHNPERI  120
SEMHRHFDAA EREQVRGPMM YGSSNDTSRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16775RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.15e-32WOX family protein