PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG016300.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 214aa MW: 24283.3 Da PI: 8.7484

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG016300.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.4	3.8e-21	78	138	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F++ n +ps++++++++++l +++e+++++WFqNrRa+ k+ TRIDC3BG016300.11 78 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 138 89***************99************************************97 PP
2	Wus_type_Homeobox	101.5	6e-33	77	140	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq TRIDC3BG016300.11 77 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 140 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
FLARCISQSW LRHCVKVMTD EQMEVLRKQI SIYATICEQL VEMHRALTAH QDSIAGMSLG 60 NLYCDPLMVH GGQKITARQR WTPTQMQLQI LESIFNQGNG TPSKQKIKDI TAELSQHGQI 120 SETNIYNWFQ NRRARSKRKQ AASSLPNNAE SEAEGDEESP TDKKPRSDGS QQQNMAVRAH 180 NLKRISEMHR HFDAAERGHV CGPTMYGSSN DTSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	140	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-59	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG016300.11