PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG016300.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 246aa MW: 27467.8 Da PI: 8.7357

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG016300.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66	4.9e-21	110	170	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F++ n +ps++++++++++l +++e+++++WFqNrRa+ k+ TRIDC3BG016300.12 110 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 170 89***************99************************************97 PP
2	Wus_type_Homeobox	101.1	7.8e-33	109	172	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq TRIDC3BG016300.12 109 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 172 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
PTAYSGRDPT PAEGPPFPLP TSQAVAMSSS GKFLARCISQ SWLRHCVKVM TDEQMEVLRK 60 QISIYATICE QLVEMHRALT AHQDSIAGMS LGNLYCDPLM VHGGQKITAR QRWTPTQMQL 120 QILESIFNQG NGTPSKQKIK DITAELSQHG QISETNIYNW FQNRRARSKR KQAASSLPNN 180 AESEAEGDEE SPTDKKPRSD GSQQQNMAVR AHNLKRISEM HRHFDAAERG HVCGPTMYGS 240 SNDTSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	172	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-58	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG016300.12