PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG016300.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 236aa MW: 26852.3 Da PI: 9.4437

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG016300.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.1	4.6e-21	100	160	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F++ n +ps++++++++++l +++e+++++WFqNrRa+ k+ TRIDC3BG016300.13 100 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 160 89***************99************************************97 PP
2	Wus_type_Homeobox	101.2	7.2e-33	99	162	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq TRIDC3BG016300.13 99 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 162 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
LVYRYIAKQT KLSFPHSFSI TSFLARCISQ SWLRHCVKVM TDEQMEVLRK QISIYATICE 60 QLVEMHRALT AHQDSIAGMS LGNLYCDPLM VHGGQKITAR QRWTPTQMQL QILESIFNQG 120 NGTPSKQKIK DITAELSQHG QISETNIYNW FQNRRARSKR KQAASSLPNN AESEAEGDEE 180 SPTDKKPRSD GSQQQNMAVR AHNLKRISEM HRHFDAAERG HVCGPTMYGS SNDTSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	162	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	6e-59	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG016300.13