PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG016300.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 227aa MW: 25650.8 Da PI: 8.641

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG016300.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.8	5.7e-21	90	150	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le +F++ n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3BG016300.3 90 RQRWTPTQMQLQILEIVFNQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 150 89***************99************************************97 PP
2	Wus_type_Homeobox	100	1.8e-32	89	152	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe ++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3BG016300.3 89 ARQRWTPTQMQLQILEIVFNQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 152 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
TSQAVAMSSS GKFLARCISQ SWLRHCVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT 60 AHQDSIAGMS LGNLYCDPLM VHGGQKITAR QRWTPTQMQL QILEIVFNQG NGTPSKQKIK 120 DITAELSQHG QISETNVYNW FQNRRARSKR KQAASSLPNN AESEAEGDEE SLTDKKPRSD 180 GSQQQNMAVR AHNPERISEM HRHFDAAERE QVRGPMMYGS SNDTSRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	152	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	6e-59	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG016300.3