PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016300.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 216aa    MW: 24432.4 Da    PI: 8.024
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016300.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.43.9e-2180140257
                       T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                       r+R+t+t+ ql++Le+ F++ n +ps++++++++++l    +++e+++++WFqNrRa+ k+
  TRIDC3BG016300.5  80 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 140
                       89*****************99**************************************97 PP
2Wus_type_Homeobox101.56.1e-3379142265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RWtPt+ Q++iLe+++++G  tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq
   TRIDC3BG016300.5  79 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 142
                        789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
VLDLDPISSQ SWLRHCVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT AHQDSIAGMS  60
LGNLYCDPLM VHGGQKITAR QRWTPTQMQL QILESIFNQG NGTPSKQKIK DITAELSQHG  120
QISETNIYNW FQNRRARSKR KQAASSLPNN AESEAEGDEE SPTDKKPRSD GSQQQNMAVR  180
AHNLKRISEM HRHFDAAERG HVCGPTMYGS SNDTSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134142RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.14e-59WOX family protein