PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG016300.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 197aa MW: 22254.8 Da PI: 8.1179

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG016300.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.6	3.2e-21	61	121	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F++ n +ps++++++++++l +++e+++++WFqNrRa+ k+ TRIDC3BG016300.9 61 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 121 89***************99************************************97 PP
2	Wus_type_Homeobox	101.7	5.1e-33	60	123	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq TRIDC3BG016300.9 60 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 123 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MTDEQMEVLR KQISIYATIC EQLVEMHRAL TAHQDSIAGM SLGNLYCDPL MVHGGQKITA 60 RQRWTPTQMQ LQILESIFNQ GNGTPSKQKI KDITAELSQH GQISETNIYN WFQNRRARSK 120 RKQAASSLPN NAESEAEGDE ESPTDKKPRS DGSQQQNMAV RAHNLKRISE MHRHFDAAER 180 GHVCGPTMYG SSNDTSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	123	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	3e-57	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG016300.9