PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016820.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 188aa    MW: 20692.8 Da    PI: 9.7164
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10349455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       h+e+ErrRR riN  +  Lr+++P       k ++Ka+ L ++v+ +k+L+
  TRIDC3BG016820.2  3 VHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVKHLK 49
                      59************************9.....67***************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
LKVHSEAERR RRVRINAHLT ALRRMIPDTK QMDKAALLAR VVDQVKHLKR RAGEAAQQTP  60
AVPPEVSIEF CTGDDDSRLY MKASVSCDDR PDLVAGLIQA LHGLRLRTVR AEVTSLGGRV  120
QHVFTLCKEE DEEGSAAAGL AGLTSLKEAA RLALARVASP ELVCGGSPFQ FQSKRQRILE  180
SHYSIMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-31bHLH family protein