PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 258aa    MW: 27528.3 Da    PI: 8.6049
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-1068113454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        h+e+ErrRR riN  +  Lr+++P       k ++Ka+ L ++v+ +k+L
  TRIDC3BG016860.1  68 VHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVKHL 113
                       59************************9.....67***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MAAPCQSPQG GNELMAYDAC YPTVSGGPAL LPRQASSAPP AGPPELSTTS SSTTGSGRTA  60
TEARALKVHS EAERRRRVRI NAHLTALRRM IPDTKQMDKA ALLARVVDQV KHLKRRAGEA  120
AQQTPAVPPE TDEVSIEFCA GDNDSRLYMK ASVSCDDRPD LVAGLIQALH GLRLRTVRAE  180
VTSLGGRVQH VFTLCKEEDE EGSAAAGLAG LTSLKEAARL ALARVASPEL VCGGTGSPFQ  240
FQSKRQRILE SHYSIMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.14e-32bHLH family protein