PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG017640.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 207aa    MW: 22105.8 Da    PI: 10.6563
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG017640.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-14116160347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E+ +++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky
  TRIDC3BG017640.2 116 PWTEDEHRRFLGGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKY 160
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MARKCSSCGH NGHNSRTCSG HRGMESGGGG LRLFGVQLQV GAAPLKKSFS MECLSSSASA  60
YNAAAAAVGV AASNSSSSVS SSSSLVSVEE SPEKMGQGYL SDGLMGRAQE RKKGVPWTED  120
EHRRFLGGLE KLGKGDWRGI SRHFVTTRTP TQVASHAQKY FLRQAGLAQK KRRSSLFDVV  180
EKNGDRGTTE RRHRLKPDAT SSVDAMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.15e-45MYB_related family protein