PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG017660.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 480aa MW: 53638.1 Da PI: 7.6005

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG017660.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.9	1.7e-35	85	227	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+Ptd+el+ e+L++kv+++ ++ e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ TRIDC3BG017660.3 85 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIN--EFIPTIDgedgICYTHPEKLP-GVTMDGLSKHFFHRPSKAYTTGTRKRRKiqtecd 173 799**********.99**99966754422..23444433445******.455567899**************7566666 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC3BG017660.3 174 vhKGETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 227 4433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
PLTRLLSISF LPRSPTPSNS TRLPSRAHAW TPSPAAACEP GDMNRGHISS SELIDAKLEE 60 HRISTARHCP NCRHKLDCKP DWLGLPAGVK FDPTDQELIE HLEAKVREEG SRSHPLINEF 120 IPTIDGEDGI CYTHPEKLPG VTMDGLSKHF FHRPSKAYTT GTRKRRKIQT ECDVHKGETR 180 WHKTGKTRPV MANGRQKGCK KILVLYTNFG KHRKPEKTNW VMHQYHLGDL EEEKEGELVV 240 CKIFYQTQPR QCSWSASSDR GGAGGAVAIA ASAAVTVQEQ RMRDSGSGSS SSRDHEALSA 300 TSYPAGYAMA AAVEMQHLKH SGDHFSFTPF RKSFEEVGIG VDQVPSDQLG RSEHQQHAGQ 360 EQQPHRPELA TTAVPATAFL VSRPTNPISA TVPPPLQHTS VVLDHDQFHV PAIFLHHEKF 420 QNMQQQHQHQ QKIDRRSAGL EELVMGCTST CTKGETSIPH SQETEWPYPY WPPDNQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

PLTRLLSISF LPRSPTPSNS TRLPSRAHAW TPSPAAACEP GDMNRGHISS SELIDAKLEE  60
HRISTARHCP NCRHKLDCKP DWLGLPAGVK FDPTDQELIE HLEAKVREEG SRSHPLINEF  120
IPTIDGEDGI CYTHPEKLPG VTMDGLSKHF FHRPSKAYTT GTRKRRKIQT ECDVHKGETR  180
WHKTGKTRPV MANGRQKGCK KILVLYTNFG KHRKPEKTNW VMHQYHLGDL EEEKEGELVV  240
CKIFYQTQPR QCSWSASSDR GGAGGAVAIA ASAAVTVQEQ RMRDSGSGSS SSRDHEALSA  300
TSYPAGYAMA AAVEMQHLKH SGDHFSFTPF RKSFEEVGIG VDQVPSDQLG RSEHQQHAGQ  360
EQQPHRPELA TTAVPATAFL VSRPTNPISA TVPPPLQHTS VVLDHDQFHV PAIFLHHEKF  420
QNMQQQHQHQ QKIDRRSAGL EELVMGCTST CTKGETSIPH SQETEWPYPY WPPDNQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-112	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG017660.3