PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG017660.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 461aa MW: 51149.7 Da PI: 8.5038

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG017660.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114	1.5e-35	97	239	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+Ptd+el+ e+L++kv+++ ++ e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ TRIDC3BG017660.5 97 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIN--EFIPTIDgedgICYTHPEKLP-GVTMDGLSKHFFHRPSKAYTTGTRKRRKiqtecd 185 799**********.99**99966754422..23444433445******.455567899**************7566666 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC3BG017660.5 186 vhKGETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 239 4433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
STRLPSVRSP ASVSRRIFDL IGMVPRVLNS ARLGPLQRAH AWTPSPAAAC EPGDMNRGHI 60 SSSELIDAKL EEHRISTARH CPNCRHKLDC KPDWLGLPAG VKFDPTDQEL IEHLEAKVRE 120 EGSRSHPLIN EFIPTIDGED GICYTHPEKL PGVTMDGLSK HFFHRPSKAY TTGTRKRRKI 180 QTECDVHKGE TRWHKTGKTR PVMANGRQKG CKKILVLYTN FGKHRKPEKT NWVMHQYHLG 240 DLEEEKEGEL VVCKIFYQTQ PRQCSWSASS DRGGAGGAVA IAASAAVTVQ EQRMRDSGSG 300 SSSSRDHEAL SATSYPAGYA MAAAVEMQHL KHSGDHFSFT PFRKSFEEVG IGVDQVPSDQ 360 LGRSEHQQHA GQEQQPHRPE LATTAVPATA FLVSRPTNPI SATVPPPLQH TSVVLDHDQF 420 HVPAIFLHHE KFQQHQQKID RRSAGLEELV MGCTSTCTKG V

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

STRLPSVRSP ASVSRRIFDL IGMVPRVLNS ARLGPLQRAH AWTPSPAAAC EPGDMNRGHI  60
SSSELIDAKL EEHRISTARH CPNCRHKLDC KPDWLGLPAG VKFDPTDQEL IEHLEAKVRE  120
EGSRSHPLIN EFIPTIDGED GICYTHPEKL PGVTMDGLSK HFFHRPSKAY TTGTRKRRKI  180
QTECDVHKGE TRWHKTGKTR PVMANGRQKG CKKILVLYTN FGKHRKPEKT NWVMHQYHLG  240
DLEEEKEGEL VVCKIFYQTQ PRQCSWSASS DRGGAGGAVA IAASAAVTVQ EQRMRDSGSG  300
SSSSRDHEAL SATSYPAGYA MAAAVEMQHL KHSGDHFSFT PFRKSFEEVG IGVDQVPSDQ  360
LGRSEHQQHA GQEQQPHRPE LATTAVPATA FLVSRPTNPI SATVPPPLQH TSVVLDHDQF  420
HVPAIFLHHE KFQQHQQKID RRSAGLEELV MGCTSTCTKG V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-112	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG017660.5