PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1101aa MW: 123628 Da PI: 7.5899

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5e-14	30	81	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.1 30 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 81 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1101 aa Download sequence
LPRPVRGLWQ LGFEMMAKGF LAKSDNAGTK KSPLQIQMLE SFYSEVQYPK PEDLTEYAAS 60 VGLTYNQVRI WFKERRRKER RHIEAAEVYM ETQATARSNW PRCSSSRSSN SSQSPMQVAD 120 TTGHHSYQDQ SVLKKRKIMS PTAQRFTLPF ENNDPVRKHG KGKGLMTVWH AMYSQTAEIQ 180 DCSSFIDETG CLRSLRPFED FGGKLAQKQT LPRKKVNKKS RSSPSKRKVP CGRVTDLKEH 240 PPVECHLSVD ESESSELRTE QATLVDDEEL ELSELQAGPN PLRCSAHISS TGRHGCPLCK 300 DLLARFPPPS VRMKQPFPTK PWESSPEMVK KLFQVVRFVY THFGSMDVHP FTFDEFAQAF 360 HDKDSSLLGK VHVSLLKLLM LNTERGSGSV FVPRSSKDSR FSSFLNFVRE QEFDVNFWIK 420 SLNSLTWVEI LRQVLVASGF GSDHHMLNRN FFNKEKNQMV KYGLRPRTLK GELFTLLSKK 480 GSGGLKVAEL AKSPQIIGLN LSGASEVEQL IFSTLSSDIT LFEKIAPCAY RLRVDPRIKG 540 KEDPRSDTED SGTVDNDGDA SSSGDESDGP QESYPEHESR IVRWRQKNVH KNMNKCSEID 600 ESYSGERWLL GLMEGEYSDL SIDEKLDCLV ALIDVVSGAG SVPRLEEPQS VLSNIQRAQS 660 HASGGKIKKC TRTIYQSSDE YLNRPGSSHS FDSSMQGQSG SLRSQDYIAD SGANESPTGF 720 AHQPQIVLLG SDRRYNNYWL FLGPCRADDP GHRRVYFESS EDGHWEVIDS PQDLLSLLSV 780 LDIRGTREAH LLASMKKRQS CLFEGMKKHL EDGCVVALTA SSDSSRSETS SGNRYSPKPS 840 SGDGASPLSD IDSASVPIYL AGNLQNASSA IGIEVGRRSD EKMLKWERLQ ALDKWIWTSF 900 YSSLTAVKCG KKSFKESLVH CESCHDLYWR DEKHCRICHS TFEVGFDLEE RYAIHVATCR 960 EPEDLYDVPN HKVLPSQLQA LKAAIHAIEA RMPTAAFAGL WMKSSHNLWV KRLRRTSSLP 1020 ELLQVLVDFV GAFDEDWLYQ SSSAVSFSSY LDDITVYFQT MPQTTSAVAL WVVKLDALIA 1080 PHLAQADSGR GLGKGSIQTR A

Sequence ? help Back to Top

Protein Sequence Length: 1101 aa Download sequence

LPRPVRGLWQ LGFEMMAKGF LAKSDNAGTK KSPLQIQMLE SFYSEVQYPK PEDLTEYAAS  60
VGLTYNQVRI WFKERRRKER RHIEAAEVYM ETQATARSNW PRCSSSRSSN SSQSPMQVAD  120
TTGHHSYQDQ SVLKKRKIMS PTAQRFTLPF ENNDPVRKHG KGKGLMTVWH AMYSQTAEIQ  180
DCSSFIDETG CLRSLRPFED FGGKLAQKQT LPRKKVNKKS RSSPSKRKVP CGRVTDLKEH  240
PPVECHLSVD ESESSELRTE QATLVDDEEL ELSELQAGPN PLRCSAHISS TGRHGCPLCK  300
DLLARFPPPS VRMKQPFPTK PWESSPEMVK KLFQVVRFVY THFGSMDVHP FTFDEFAQAF  360
HDKDSSLLGK VHVSLLKLLM LNTERGSGSV FVPRSSKDSR FSSFLNFVRE QEFDVNFWIK  420
SLNSLTWVEI LRQVLVASGF GSDHHMLNRN FFNKEKNQMV KYGLRPRTLK GELFTLLSKK  480
GSGGLKVAEL AKSPQIIGLN LSGASEVEQL IFSTLSSDIT LFEKIAPCAY RLRVDPRIKG  540
KEDPRSDTED SGTVDNDGDA SSSGDESDGP QESYPEHESR IVRWRQKNVH KNMNKCSEID  600
ESYSGERWLL GLMEGEYSDL SIDEKLDCLV ALIDVVSGAG SVPRLEEPQS VLSNIQRAQS  660
HASGGKIKKC TRTIYQSSDE YLNRPGSSHS FDSSMQGQSG SLRSQDYIAD SGANESPTGF  720
AHQPQIVLLG SDRRYNNYWL FLGPCRADDP GHRRVYFESS EDGHWEVIDS PQDLLSLLSV  780
LDIRGTREAH LLASMKKRQS CLFEGMKKHL EDGCVVALTA SSDSSRSETS SGNRYSPKPS  840
SGDGASPLSD IDSASVPIYL AGNLQNASSA IGIEVGRRSD EKMLKWERLQ ALDKWIWTSF  900
YSSLTAVKCG KKSFKESLVH CESCHDLYWR DEKHCRICHS TFEVGFDLEE RYAIHVATCR  960
EPEDLYDVPN HKVLPSQLQA LKAAIHAIEA RMPTAAFAGL WMKSSHNLWV KRLRRTSSLP  1020
ELLQVLVDFV GAFDEDWLYQ SSSAVSFSSY LDDITVYFQT MPQTTSAVAL WVVKLDALIA  1080
PHLAQADSGR GLGKGSIQTR A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	163	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-134	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.1