PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1088aa MW: 122077 Da PI: 7.496

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5e-14	16	67	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.13 16 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 67 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE 60 RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQVVADTTG HHSYQDQSVL 120 KKRKIMSPTA QRFTLPFENN DPVRKHGKGK GLMTVWHAMY SQTAEIQDCS SFIDETGCLR 180 SLRPFEDFGG KLAQKQTLPR KKVNKKSRSS PSKRKVPCGR VTDLKEHPPV ECHLSVDESE 240 SSELRTEQAT LVDDEELELS ELQAGPNPLR CSAHISSTGR HGCPLCKDLL ARFPPPSVRM 300 KQPFPTKPWE SSPEMVKKLF QVVRFVYTHF GSMDVHPFTF DEFAQAFHDK DSSLLGKVHV 360 SLLKLLMLNT ERGSGSVFVP RSSKDSRFSS FLNFVREQEF DVNFWIKSLN SLTWVEILRQ 420 VLVASGFGSD HHMLNRNFFN KEKNQMVKYG LRPRTLKGEL FTLLSKKGSG GLKVAELAKS 480 PQIIGLNLSG ASEVEQLIFS TLSSDITLFE KIAPCAYRLR VDPRIKGKED PRSDTEDSGT 540 VDNDGDASSS GDESDGPQES YPEHESRIVR WRQKNVHKNM NKCSEIDESY SGERWLLGLM 600 EGEYSDLSID EKLDCLVALI DVVSGAGSVP RLEEPQSVLS NIQRAQSHAS GGKIKKCTRT 660 IYQSSDEYLN RPGSSHSFDS SMQGQSGSLR SQDYIADSGA NESPTGFAHQ PQIVLLGSDR 720 RYNNYWLFLG PCRADDPGHR RVYFESSEDG HWEVIDSPQD LLSLLSVLDI RGTREAHLLA 780 SMKKRQSCLF EGMKKHLEDG CVVALTASSD SSRSETSSGN RYSPKPSSGD GASPLSDIDS 840 ASVPIYLAGN LQNASSAIGI EVGRRSDEKM LKWERLQALD KWIWTSFYSS LTAVKCGKKS 900 FKESLVHCES CHDLYWRDEK HCRICHSTFE VGFDLEERYA IHVATCREPE DLYDVPNHKV 960 LPSQLQALKA AIHAIEARMP TAAFAGLWMK SSHNLWVKRL RRTSSLPELL QVLVDFVGAF 1020 DEDWLYQSSS AVSFSSYLDD ITVYFQTMPQ TTSAVALWVV KLDALIAPHL AQADSGRGLG 1080 KGSIQTRA

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE  60
RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQVVADTTG HHSYQDQSVL  120
KKRKIMSPTA QRFTLPFENN DPVRKHGKGK GLMTVWHAMY SQTAEIQDCS SFIDETGCLR  180
SLRPFEDFGG KLAQKQTLPR KKVNKKSRSS PSKRKVPCGR VTDLKEHPPV ECHLSVDESE  240
SSELRTEQAT LVDDEELELS ELQAGPNPLR CSAHISSTGR HGCPLCKDLL ARFPPPSVRM  300
KQPFPTKPWE SSPEMVKKLF QVVRFVYTHF GSMDVHPFTF DEFAQAFHDK DSSLLGKVHV  360
SLLKLLMLNT ERGSGSVFVP RSSKDSRFSS FLNFVREQEF DVNFWIKSLN SLTWVEILRQ  420
VLVASGFGSD HHMLNRNFFN KEKNQMVKYG LRPRTLKGEL FTLLSKKGSG GLKVAELAKS  480
PQIIGLNLSG ASEVEQLIFS TLSSDITLFE KIAPCAYRLR VDPRIKGKED PRSDTEDSGT  540
VDNDGDASSS GDESDGPQES YPEHESRIVR WRQKNVHKNM NKCSEIDESY SGERWLLGLM  600
EGEYSDLSID EKLDCLVALI DVVSGAGSVP RLEEPQSVLS NIQRAQSHAS GGKIKKCTRT  660
IYQSSDEYLN RPGSSHSFDS SMQGQSGSLR SQDYIADSGA NESPTGFAHQ PQIVLLGSDR  720
RYNNYWLFLG PCRADDPGHR RVYFESSEDG HWEVIDSPQD LLSLLSVLDI RGTREAHLLA  780
SMKKRQSCLF EGMKKHLEDG CVVALTASSD SSRSETSSGN RYSPKPSSGD GASPLSDIDS  840
ASVPIYLAGN LQNASSAIGI EVGRRSDEKM LKWERLQALD KWIWTSFYSS LTAVKCGKKS  900
FKESLVHCES CHDLYWRDEK HCRICHSTFE VGFDLEERYA IHVATCREPE DLYDVPNHKV  960
LPSQLQALKA AIHAIEARMP TAAFAGLWMK SSHNLWVKRL RRTSSLPELL QVLVDFVGAF  1020
DEDWLYQSSS AVSFSSYLDD ITVYFQTMPQ TTSAVALWVV KLDALIAPHL AQADSGRGLG  1080
KGSIQTRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	150	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-135	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.13