PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.18

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 983aa MW: 110332 Da PI: 7.3851

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.18	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.8	4.4e-14	26	77	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.18 26 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 77 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
QASALSAPGS MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT 60 YNQVRIWFKE RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQDTTGHHS 120 YQDQSVLKKR KIMSPTAQRF TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI 180 DETGCLRSLR PFEDFGGKLA QKQTLPRKKV NKKSRSSPSK RKVPCGRVTD LKEHPPVECH 240 LSVDESESSE LRTEQATLVD DEELELSELQ AGPNPLRCSA HISSTGRHGC PLCKDLLARF 300 PPPSVRMKQP FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHDKDSS 360 LLGKVHVSLL KLLMLNTERG SGSVFVPRSS KDSRFSSFLN FVREQEFDVN FWIKSLNSLT 420 WVEILRQVLV ASGFGSDHHM LNRNFFNKEK NQMVKYGLRP RTLKGELFTL LSKKGSGGLK 480 VAELAKSPQI IGLNLSGASE VEQLIFSTLS SDITLFEKIA PCAYRLRVDP RIKGKEDPRS 540 DTEDSGTVDN DGDASSSGDE SDGPQESYPE HESRIVRWRQ KNVHKNMNKC SEIDESYSGE 600 RWLLGLMEGE YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSNIQ RAQSHASGGK 660 IKKCTRTIYQ SSDEYLNRPG SSHSFDSSMQ GQSGSLRSQD YIADSGANES PTGFAHQPQI 720 VLLGSDRRYN NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT 780 REAHLLASMK KRQSCLFEGM KKHLEDGCVV ALTASSDSSR SETSSGNRYS PKPSSGDGAS 840 PLSDIDSASV PIYLAGNLQN ASSAIGIEVG RRSDEKMLKW ERLQALDKWI WTSFYSSLTA 900 VKCGKKSFKE SLVHCESCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY 960 DVPNHKVLPS QLQALKAAIH AIE

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

QASALSAPGS MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT  60
YNQVRIWFKE RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQDTTGHHS  120
YQDQSVLKKR KIMSPTAQRF TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI  180
DETGCLRSLR PFEDFGGKLA QKQTLPRKKV NKKSRSSPSK RKVPCGRVTD LKEHPPVECH  240
LSVDESESSE LRTEQATLVD DEELELSELQ AGPNPLRCSA HISSTGRHGC PLCKDLLARF  300
PPPSVRMKQP FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHDKDSS  360
LLGKVHVSLL KLLMLNTERG SGSVFVPRSS KDSRFSSFLN FVREQEFDVN FWIKSLNSLT  420
WVEILRQVLV ASGFGSDHHM LNRNFFNKEK NQMVKYGLRP RTLKGELFTL LSKKGSGGLK  480
VAELAKSPQI IGLNLSGASE VEQLIFSTLS SDITLFEKIA PCAYRLRVDP RIKGKEDPRS  540
DTEDSGTVDN DGDASSSGDE SDGPQESYPE HESRIVRWRQ KNVHKNMNKC SEIDESYSGE  600
RWLLGLMEGE YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSNIQ RAQSHASGGK  660
IKKCTRTIYQ SSDEYLNRPG SSHSFDSSMQ GQSGSLRSQD YIADSGANES PTGFAHQPQI  720
VLLGSDRRYN NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT  780
REAHLLASMK KRQSCLFEGM KKHLEDGCVV ALTASSDSSR SETSSGNRYS PKPSSGDGAS  840
PLSDIDSASV PIYLAGNLQN ASSAIGIEVG RRSDEKMLKW ERLQALDKWI WTSFYSSLTA  900
VKCGKKSFKE SLVHCESCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY  960
DVPNHKVLPS QLQALKAAIH AIE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	157	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	2e-99	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.18