PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.19

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 980aa MW: 110178 Da PI: 7.2961

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.19	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.8	4.4e-14	20	71	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.19 20 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 71 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 980 aa Download sequence
LGFEMMAKGF LAKSDNAGTK KSPLQIQMLE SFYSEVQYPK PEDLTEYAAS VGLTYNQVRI 60 WFKERRRKER RHIEAAEVYM ETQATARSNW PRCSSSRSSN SSQSPMQVVA DTTGHHSYQD 120 QSVLKKRKIM SPTAQRFTLP FENNDPVRKH GKGKGLMTVW HAMYSQTAEI QDCSSFIDET 180 GCLRSLRPFE DFGGKLAQKQ TLPRKKVNKK SRSSPSKRKV PCGRVTDLKE HPPVECHLSV 240 DESESSELRT EQATLVDDEE LELSELQAGP NPLRCSAHIS STGRHGCPLC KDLLARFPPP 300 SVRMKQPFPT KPWESSPEMV KKLFQVVRFV YTHFGSMDVH PFTFDEFAQA FHDKDSSLLG 360 KVHVSLLKLL MLNTERGSGS VFVPRSSKDS RFSSFLNFVR EQEFDVNFWI KSLNSLTWVE 420 ILRQVLVASG FGSDHHMLNR NFFNKEKNQM VKYGLRPRTL KGELFTLLSK KGSGGLKVAE 480 LAKSPQIIGL NLSGASEVEQ LIFSTLSSDI TLFEKIAPCA YRLRVDPRIK GKEDPRSDTE 540 DSGTVDNDGD ASSSGDESDG PQESYPEHES RIVRWRQKNV HKNMNKCSEI DESYSGERWL 600 LGLMEGEYSD LSIDEKLDCL VALIDVVSGA GSVPRLEEPQ SVLSNIQRAQ SHASGGKIKK 660 CTRTIYQSSD EYLNRPGSSH SFDSSMQGQS GSLRSQDYIA DSGANESPTG FAHQPQIVLL 720 GSDRRYNNYW LFLGPCRADD PGHRRVYFES SEDGHWEVID SPQDLLSLLS VLDIRGTREA 780 HLLASMKKRQ SCLFEGMKKH LEDGCVVALT ASSDSSRSET SSGNRYSPKP SSGDGASPLS 840 DIDSASVPIY LAGNLQNASS AIGIEVGRRS DEKMLKWERL QALDKWIWTS FYSSLTAVKC 900 GKKSFKESLV HCESCHDLYW RDEKHCRICH STFEVGFDLE ERYAIHVATC REPEDLYDVP 960 NHKVLPSQLQ ALKAAIHAIE

Sequence ? help Back to Top

Protein Sequence Length: 980 aa Download sequence

LGFEMMAKGF LAKSDNAGTK KSPLQIQMLE SFYSEVQYPK PEDLTEYAAS VGLTYNQVRI  60
WFKERRRKER RHIEAAEVYM ETQATARSNW PRCSSSRSSN SSQSPMQVVA DTTGHHSYQD  120
QSVLKKRKIM SPTAQRFTLP FENNDPVRKH GKGKGLMTVW HAMYSQTAEI QDCSSFIDET  180
GCLRSLRPFE DFGGKLAQKQ TLPRKKVNKK SRSSPSKRKV PCGRVTDLKE HPPVECHLSV  240
DESESSELRT EQATLVDDEE LELSELQAGP NPLRCSAHIS STGRHGCPLC KDLLARFPPP  300
SVRMKQPFPT KPWESSPEMV KKLFQVVRFV YTHFGSMDVH PFTFDEFAQA FHDKDSSLLG  360
KVHVSLLKLL MLNTERGSGS VFVPRSSKDS RFSSFLNFVR EQEFDVNFWI KSLNSLTWVE  420
ILRQVLVASG FGSDHHMLNR NFFNKEKNQM VKYGLRPRTL KGELFTLLSK KGSGGLKVAE  480
LAKSPQIIGL NLSGASEVEQ LIFSTLSSDI TLFEKIAPCA YRLRVDPRIK GKEDPRSDTE  540
DSGTVDNDGD ASSSGDESDG PQESYPEHES RIVRWRQKNV HKNMNKCSEI DESYSGERWL  600
LGLMEGEYSD LSIDEKLDCL VALIDVVSGA GSVPRLEEPQ SVLSNIQRAQ SHASGGKIKK  660
CTRTIYQSSD EYLNRPGSSH SFDSSMQGQS GSLRSQDYIA DSGANESPTG FAHQPQIVLL  720
GSDRRYNNYW LFLGPCRADD PGHRRVYFES SEDGHWEVID SPQDLLSLLS VLDIRGTREA  780
HLLASMKKRQ SCLFEGMKKH LEDGCVVALT ASSDSSRSET SSGNRYSPKP SSGDGASPLS  840
DIDSASVPIY LAGNLQNASS AIGIEVGRRS DEKMLKWERL QALDKWIWTS FYSSLTAVKC  900
GKKSFKESLV HCESCHDLYW RDEKHCRICH STFEVGFDLE ERYAIHVATC REPEDLYDVP  960
NHKVLPSQLQ ALKAAIHAIE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	154	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	3e-99	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.19