PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.23

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 349aa MW: 39421.9 Da PI: 9.6534

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.23	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	45.7	1.1e-14	44	95	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.23 44 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 95 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
SPPSPSPCLL VGTSLPRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV 60 QYPKPEDLTE YAASVGLTYN QVRIWFKERR RKERRHIEAA EVYMETQATA RSNWPRCSSS 120 RSSNSSQSPM QVVADTTGHH SYQDQSVLKK RKIMSPTAQR FTLPFENNDP VRKHGKGKGL 180 MTVWHAMYSQ TAEIQDCSSF IDETGCLRSL RPFEDFGGKL AQKQTLPRKK VNKKSRSSPS 240 KRKVPCGRVT DLKEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS 300 AHISSTGRHG CPLCKDLLAR FPPPSVRMKQ PFPTKPWESS PEMVKKLFQ

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

SPPSPSPCLL VGTSLPRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV  60
QYPKPEDLTE YAASVGLTYN QVRIWFKERR RKERRHIEAA EVYMETQATA RSNWPRCSSS  120
RSSNSSQSPM QVVADTTGHH SYQDQSVLKK RKIMSPTAQR FTLPFENNDP VRKHGKGKGL  180
MTVWHAMYSQ TAEIQDCSSF IDETGCLRSL RPFEDFGGKL AQKQTLPRKK VNKKSRSSPS  240
KRKVPCGRVT DLKEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS  300
AHISSTGRHG CPLCKDLLAR FPPPSVRMKQ PFPTKPWESS PEMVKKLFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	178	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-22	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.23