PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1124aa MW: 125846 Da PI: 7.6606

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5.2e-14	52	103	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.3 52 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 103 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1124 aa Download sequence
PAPRLSCASP PSPSPCLLVG TSLPRPVRGL WQLGFEMMAK GFLAKSDNAG TKKSPLQIQM 60 LESFYSEVQY PKPEDLTEYA ASVGLTYNQV RIWFKERRRK ERRHIEAAEV YMETQATARS 120 NWPRCSSSRS SNSSQSPMQV VADTTGHHSY QDQSVLKKRK IMSPTAQRFT LPFENNDPVR 180 KHGKGKGLMT VWHAMYSQTA EIQDCSSFID ETGCLRSLRP FEDFGGKLAQ KQTLPRKKVN 240 KKSRSSPSKR KVPCGRVTDL KEHPPVECHL SVDESESSEL RTEQATLVDD EELELSELQA 300 GPNPLRCSAH ISSTGRHGCP LCKDLLARFP PPSVRMKQPF PTKPWESSPE MVKKLFQVVR 360 FVYTHFGSMD VHPFTFDEFA QAFHDKDSSL LGKVHVSLLK LLMLNTERGS GSVFVPRSSK 420 DSRFSSFLNF VREQEFDVNF WIKSLNSLTW VEILRQVLVA SGFGSDHHML NRNFFNKEKN 480 QMVKYGLRPR TLKGELFTLL SKKGSGGLKV AELAKSPQII GLNLSGASEV EQLIFSTLSS 540 DITLFEKIAP CAYRLRVDPR IKGKEDPRSD TEDSGTVDND GDASSSGDES DGPQESYPEH 600 ESRIVRWRQK NVHKNMNKCS EIDESYSGER WLLGLMEGEY SDLSIDEKLD CLVALIDVVS 660 GAGSVPRLEE PQSVLSNIQR AQSHASGGKI KKCTRTIYQS SDEYLNRPGS SHSFDSSMQG 720 QSGSLRSQDY IADSGANESP TGFAHQPQIV LLGSDRRYNN YWLFLGPCRA DDPGHRRVYF 780 ESSEDGHWEV IDSPQDLLSL LSVLDIRGTR EAHLLASMKK RQSCLFEGMK KHLEDGCVVA 840 LTASSDSSRS ETSSGNRYSP KPSSGDGASP LSDIDSASVP IYLAGNLQNA SSAIGIEVGR 900 RSDEKMLKWE RLQALDKWIW TSFYSSLTAV KCGKKSFKES LVHCESCHDL YWRDEKHCRI 960 CHSTFEVGFD LEERYAIHVA TCREPEDLYD VPNHKVLPSQ LQALKAAIHA IEARMPTAAF 1020 AGLWMKSSHN LWVKRLRRTS SLPELLQVLV DFVGAFDEDW LYQSSSAVSF SSYLDDITVY 1080 FQTMPQTTSA VALWVVKLDA LIAPHLAQAD SGRGLGKGSI QTRA

Sequence ? help Back to Top

Protein Sequence Length: 1124 aa Download sequence

PAPRLSCASP PSPSPCLLVG TSLPRPVRGL WQLGFEMMAK GFLAKSDNAG TKKSPLQIQM  60
LESFYSEVQY PKPEDLTEYA ASVGLTYNQV RIWFKERRRK ERRHIEAAEV YMETQATARS  120
NWPRCSSSRS SNSSQSPMQV VADTTGHHSY QDQSVLKKRK IMSPTAQRFT LPFENNDPVR  180
KHGKGKGLMT VWHAMYSQTA EIQDCSSFID ETGCLRSLRP FEDFGGKLAQ KQTLPRKKVN  240
KKSRSSPSKR KVPCGRVTDL KEHPPVECHL SVDESESSEL RTEQATLVDD EELELSELQA  300
GPNPLRCSAH ISSTGRHGCP LCKDLLARFP PPSVRMKQPF PTKPWESSPE MVKKLFQVVR  360
FVYTHFGSMD VHPFTFDEFA QAFHDKDSSL LGKVHVSLLK LLMLNTERGS GSVFVPRSSK  420
DSRFSSFLNF VREQEFDVNF WIKSLNSLTW VEILRQVLVA SGFGSDHHML NRNFFNKEKN  480
QMVKYGLRPR TLKGELFTLL SKKGSGGLKV AELAKSPQII GLNLSGASEV EQLIFSTLSS  540
DITLFEKIAP CAYRLRVDPR IKGKEDPRSD TEDSGTVDND GDASSSGDES DGPQESYPEH  600
ESRIVRWRQK NVHKNMNKCS EIDESYSGER WLLGLMEGEY SDLSIDEKLD CLVALIDVVS  660
GAGSVPRLEE PQSVLSNIQR AQSHASGGKI KKCTRTIYQS SDEYLNRPGS SHSFDSSMQG  720
QSGSLRSQDY IADSGANESP TGFAHQPQIV LLGSDRRYNN YWLFLGPCRA DDPGHRRVYF  780
ESSEDGHWEV IDSPQDLLSL LSVLDIRGTR EAHLLASMKK RQSCLFEGMK KHLEDGCVVA  840
LTASSDSSRS ETSSGNRYSP KPSSGDGASP LSDIDSASVP IYLAGNLQNA SSAIGIEVGR  900
RSDEKMLKWE RLQALDKWIW TSFYSSLTAV KCGKKSFKES LVHCESCHDL YWRDEKHCRI  960
CHSTFEVGFD LEERYAIHVA TCREPEDLYD VPNHKVLPSQ LQALKAAIHA IEARMPTAAF  1020
AGLWMKSSHN LWVKRLRRTS SLPELLQVLV DFVGAFDEDW LYQSSSAVSF SSYLDDITVY  1080
FQTMPQTTSA VALWVVKLDA LIAPHLAQAD SGRGLGKGSI QTRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	186	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-134	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.3