PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1085aa MW: 121807 Da PI: 7.496

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	4.9e-14	16	67	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.7 16 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 67 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence
MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE 60 RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQDTTGHHS YQDQSVLKKR 120 KIMSPTAQRF TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DETGCLRSLR 180 PFEDFGGKLA QKQTLPRKKV NKKSRSSPSK RKVPCGRVTD LKEHPPVECH LSVDESESSE 240 LRTEQATLVD DEELELSELQ AGPNPLRCSA HISSTGRHGC PLCKDLLARF PPPSVRMKQP 300 FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHDKDSS LLGKVHVSLL 360 KLLMLNTERG SGSVFVPRSS KDSRFSSFLN FVREQEFDVN FWIKSLNSLT WVEILRQVLV 420 ASGFGSDHHM LNRNFFNKEK NQMVKYGLRP RTLKGELFTL LSKKGSGGLK VAELAKSPQI 480 IGLNLSGASE VEQLIFSTLS SDITLFEKIA PCAYRLRVDP RIKGKEDPRS DTEDSGTVDN 540 DGDASSSGDE SDGPQESYPE HESRIVRWRQ KNVHKNMNKC SEIDESYSGE RWLLGLMEGE 600 YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSNIQ RAQSHASGGK IKKCTRTIYQ 660 SSDEYLNRPG SSHSFDSSMQ GQSGSLRSQD YIADSGANES PTGFAHQPQI VLLGSDRRYN 720 NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT REAHLLASMK 780 KRQSCLFEGM KKHLEDGCVV ALTASSDSSR SETSSGNRYS PKPSSGDGAS PLSDIDSASV 840 PIYLAGNLQN ASSAIGIEVG RRSDEKMLKW ERLQALDKWI WTSFYSSLTA VKCGKKSFKE 900 SLVHCESCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY DVPNHKVLPS 960 QLQALKAAIH AIEARMPTAA FAGLWMKSSH NLWVKRLRRT SSLPELLQVL VDFVGAFDED 1020 WLYQSSSAVS FSSYLDDITV YFQTMPQTTS AVALWVVKLD ALIAPHLAQA DSGRGLGKGS 1080 IQTRA

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence

MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE  60
RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQDTTGHHS YQDQSVLKKR  120
KIMSPTAQRF TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DETGCLRSLR  180
PFEDFGGKLA QKQTLPRKKV NKKSRSSPSK RKVPCGRVTD LKEHPPVECH LSVDESESSE  240
LRTEQATLVD DEELELSELQ AGPNPLRCSA HISSTGRHGC PLCKDLLARF PPPSVRMKQP  300
FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHDKDSS LLGKVHVSLL  360
KLLMLNTERG SGSVFVPRSS KDSRFSSFLN FVREQEFDVN FWIKSLNSLT WVEILRQVLV  420
ASGFGSDHHM LNRNFFNKEK NQMVKYGLRP RTLKGELFTL LSKKGSGGLK VAELAKSPQI  480
IGLNLSGASE VEQLIFSTLS SDITLFEKIA PCAYRLRVDP RIKGKEDPRS DTEDSGTVDN  540
DGDASSSGDE SDGPQESYPE HESRIVRWRQ KNVHKNMNKC SEIDESYSGE RWLLGLMEGE  600
YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSNIQ RAQSHASGGK IKKCTRTIYQ  660
SSDEYLNRPG SSHSFDSSMQ GQSGSLRSQD YIADSGANES PTGFAHQPQI VLLGSDRRYN  720
NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT REAHLLASMK  780
KRQSCLFEGM KKHLEDGCVV ALTASSDSSR SETSSGNRYS PKPSSGDGAS PLSDIDSASV  840
PIYLAGNLQN ASSAIGIEVG RRSDEKMLKW ERLQALDKWI WTSFYSSLTA VKCGKKSFKE  900
SLVHCESCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY DVPNHKVLPS  960
QLQALKAAIH AIEARMPTAA FAGLWMKSSH NLWVKRLRRT SSLPELLQVL VDFVGAFDED  1020
WLYQSSSAVS FSSYLDDITV YFQTMPQTTS AVALWVVKLD ALIAPHLAQA DSGRGLGKGS  1080
IQTRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	147	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-135	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.7