PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 123aa MW: 13341.3 Da PI: 10.9418

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.3	5.7e-20	21	85	22	85
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdql 85 +++++k++W++vs++m ergf++sp+qC++k+++lnkryk++ e +++t ++++ + +++d + TRIDC3BG018950.1 21 AAAQQRKGKWRSVSRAMVERGFKVSPQQCEDKFNDLNKRYKRVVELLGRGTaCNVVANPALLDTM 85 45789********************************************9549999999888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
GVSAGGKAAA AHSHGKAVAS AAAQQRKGKW RSVSRAMVER GFKVSPQQCE DKFNDLNKRY 60 KRVVELLGRG TACNVVANPA LLDTMGELTA KAKEEARKLL RSKRLFFREM CHYHNPGGTA 120 TAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-35	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018950.1