PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG019550.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 244aa    MW: 28183.1 Da    PI: 8.9064
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG019550.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.11.4e-1866151191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY+ YAk+ GF v ++++++  +++ +t  t+ Cs++gk++ ++k+   +  ++++tr++C ak + +++ ++k+++t+l l+HnH+++p
  TRIDC3BG019550.6  66 RFYKGYAKKKGFGVMRRTTRYG-EDNMVTYFTLACSRQGKTQCSEKN---SFMPNPSTRMQCLAKSNFSRR-EEKFCITSLTLDHNHPISP 151
                       5***************999998.5666****************9999...999*****************9.9**************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MRYSIEPGLN LDEVAEQNRP VLDEDDEDAF IVEEIGDSSD ERQVKPIRTL ESRKGMVFDS  60
EDDAVRFYKG YAKKKGFGVM RRTTRYGEDN MVTYFTLACS RQGKTQCSEK NSFMPNPSTR  120
MQCLAKSNFS RREEKFCITS LTLDHNHPIS PSKSRFFRCH KKLDLHSKRR LELNDQAGIR  180
MNKNFGSLVM EAGGYGNLEF GRKECRNARE KKAATWCWRC TCCLSIFSSY AIKRSRLFPC  240
YGCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-06FAR1 family protein