PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG020230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 472aa    MW: 50180.6 Da    PI: 6.0549
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG020230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.41.2e-31261316156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       k+r++W+peLH+rFv+a++ LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  TRIDC3BG020230.1 261 KARRCWSPELHRRFVNALQILGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 316
                       68****************************************************97 PP
2Myb_DNA-binding41.23.9e-13263314148
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W++e++ ++v+a + lGg    t+k I + m   g+t  ++ks++qky+
  TRIDC3BG020230.1 263 RRCWSPELHRRFVNALQILGGAqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 314
                       568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MDSSPSDLTL DYTPSGNGAA SAGGGYPKQA SPVVDHHHHL SAEQATTQKL QEFLARLDDE  60
RLKIDAFKRE LPLCMQLLNQ AMEAYRQQLE ACQMGSHGGA AARAPLVLEE FIPLKNIGID  120
AAEKAAGNAP SEKANWMVSA QLWNGPAAGD AAAKGPQTPK ERSEHPLDTS PMLGGLDGGS  180
GNGVGAFLPF TKEKACMAES AALPELGLAP AEKDREADRK PYHDDGGSNG TVVSRRDVGA  240
PPTSTAPEGQ SVPPAPQTNR KARRCWSPEL HRRFVNALQI LGGAQVATPK QIRELMKVDG  300
LTNDEVKSHL QKYRLHTRRP MPAPTAPPAG APQLVVLGGI WMPPDYAAQG AGPTAIYGAH  360
PATQAHYTAA VSAQEYYQNA AAAAHHGHHM QHHQAASMVH HRAVAPTPPQ TAYKVHPVSA  420
AGSQGSSEGR RSSGGGRERS ESIEEEGEER EDEEDEDEDG MAANGDAEQI NY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.18e-78G2-like family protein